Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/310a6efa6318fbcac1a7d3e68e9005b30221c9aecontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 310a6efa6318fbcac1a7d3e68e9005b30221c9ae
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CTCTTGATCCGCACAA-1, GAGTGTTTCCGCCTCA-1, CCTGCTCCAGGCTTCG-1, GCAATAGAGCCAGTAT-1, ACGACTTAGGTTAGAG-1 (top 5 of 7730 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
310a6efa6318fbcac1a7d3e68e9005b30221c9ae.gz 2.52 GB 7454018d59284f1f0f028e4d2dda78aa
310a6efa6318fbcac1a7d3e68e9005b30221c9ae.gz.tbi 1.18 MB d10bad8b5fef38da56fab5a9a39d6e27
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB aa0e3ebf62619ae80baa0dbfc2676e35
statistics/