Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/31c30a367929362bed848f59f4076a735dbfa0b2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 31c30a367929362bed848f59f4076a735dbfa0b2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACACAATGTTGTTGTC-1, GCCTTTGGTCAAGTGC-1, ACAGCCGGTTGCACGG-1, CAGGTGGAGCGGATTT-1, AAAGCGGGTGAAACAA-1 (top 5 of 6044 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
31c30a367929362bed848f59f4076a735dbfa0b2.gz 3.08 GB 66167ba6508f25b9fd21c8ae49b2449f
31c30a367929362bed848f59f4076a735dbfa0b2.gz.tbi 1.31 MB e8e94f96fe550d8e2b1c043d59c9a5f6
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB cb3cec2d4802626e76f5922d7c71347e
statistics/