Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/327dca5a58589d016de4742770aaedcf126f1f66content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 327dca5a58589d016de4742770aaedcf126f1f66
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTAAGCTTCACAAGCT-1, CACCTCAGTTCGCTTG-1, GGTTAGCGTATTGAGT-1, TGTATCGCATAAAGCA-1, CGGCAATGTATGGTGC-1 (top 5 of 4470 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
327dca5a58589d016de4742770aaedcf126f1f66.gz 1.92 GB 2ace9633184860a9b5c3f8c2e8302de4
327dca5a58589d016de4742770aaedcf126f1f66.gz.tbi 1.01 MB fb2edf8db7d01411bc61d7792a659dd7
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB fdf60348b8639f7a32bd7b468eece9d3
statistics/