Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/4449d5ba0d88e4ad61c10b02be14b9c09aec520econtent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 4449d5ba0d88e4ad61c10b02be14b9c09aec520e
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AGGATGCAGCTGGCTA-1, AGGTCCGGTGATGGCT-1, ATATAGGCAGCAACAG-1, TGAGGAGGTTTGTCTA-1, ACCCAACCAACGTGCT-1 (top 5 of 4318 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
4449d5ba0d88e4ad61c10b02be14b9c09aec520e.gz 2.13 GB 4d13e19e7c9e1154eb50f9a1d523e122
4449d5ba0d88e4ad61c10b02be14b9c09aec520e.gz.tbi 1.07 MB a4ec559bc9262b59b720afd93a4fcfdf
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 738683b9e22ca2e19bc771833231e935
statistics/