Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/44c17a26ca9c6f204075ddc6f10e1029fdcea4c5content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 44c17a26ca9c6f204075ddc6f10e1029fdcea4c5
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGCATGAGTGCGCGTA-1, CTCCAACTCGCACAAT-1, GTCCAAGTCCAGGTCA-1, CTAATCCGTGTTTGTC-1, GGCCTTCGTTTAGTCC-1 (top 5 of 12833 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
44c17a26ca9c6f204075ddc6f10e1029fdcea4c5.gz 2.78 GB 5a97d2034f4c6c78ca495e0c9697979c
44c17a26ca9c6f204075ddc6f10e1029fdcea4c5.gz.tbi 1.2 MB b8bb5762164e05a242a3432280514fab
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 64a0b41f65a2a2c44c08d5cacda224b5
statistics/