Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/45e8ba46213b4a6c7b6977429ac7e5aa0d8b707acontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 45e8ba46213b4a6c7b6977429ac7e5aa0d8b707a
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTCCTCAGTGCATTAG-1, TTTAGCTTCCGTAAAC-1, TAGCATATCGATTTGA-1, ATCGCCCGTCATGAGC-1, TGTATCCGTCACACCC-1 (top 5 of 6292 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
45e8ba46213b4a6c7b6977429ac7e5aa0d8b707a.gz 2.33 GB d603238793d37cd4a288ac44214ff2d8
45e8ba46213b4a6c7b6977429ac7e5aa0d8b707a.gz.tbi 1.11 MB 1fbe05c82bcb1fe9d6e351dcee3d9725
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 29f9d64c0356ff3d54f4f37638156a29
statistics/