Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/57ff455ee7f15ad6ccdb958681a21469188d26a8content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 57ff455ee7f15ad6ccdb958681a21469188d26a8
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGAAGGATCTTAGGGT-1, GTACGTAGTAACGGGA-1, TTGACTAAGCGCCTTT-1, AGGAAACGTTAGTGAT-1, ATTAGCGGTAACGGGA-1 (top 5 of 5625 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
57ff455ee7f15ad6ccdb958681a21469188d26a8.gz 1.86 GB 8dd2ed9a33541126bf4cc017c3254180
57ff455ee7f15ad6ccdb958681a21469188d26a8.gz.tbi 1019.09 KB faeea1bead300d11f70287ae258a1cf1
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB e3412c2710de6812d692db290332eca9
statistics/