Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/5a3df91f130e2f56c53d9ec88a56c3d7e9722c27content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 5a3df91f130e2f56c53d9ec88a56c3d7e9722c27
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGTTGAGCACAACCTA-1, GGGTGTTGTAACGTGC-1, TTGGGTTAGCGATACT-1, ACCACACCAAGCGAGC-1, GTAGTTATCGCTCCAT-1 (top 5 of 1233 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
5a3df91f130e2f56c53d9ec88a56c3d7e9722c27.gz 435.67 MB aa9e2c5167d379ea0ba4dd3f9672d3c8
5a3df91f130e2f56c53d9ec88a56c3d7e9722c27.gz.tbi 610.73 KB ad6975ab8f1c6baa375397d871e57867
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB b914b1937b17486aa2140d1edfcbb146
statistics/