Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/5d681b93be1050723369db600094b00837b39c11content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 5d681b93be1050723369db600094b00837b39c11
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GCTCGATCAGCCTAAC-1, CTACTTAGTGAGACTC-1, AGTGCCGGTTTATTCG-1, CATGCGCAGGACCGCT-1, TGGTCAAGTTGCATCT-1 (top 5 of 2876 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
5d681b93be1050723369db600094b00837b39c11.gz 903.81 MB 3122662dcc66ccd62c872ddb0b6f4c87
5d681b93be1050723369db600094b00837b39c11.gz.tbi 748.64 KB 1a5b6bf9db8e7ef722f1f5323246f5b1
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB c83dea4048e1017228d2c4e694aa88e6
statistics/