Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/63632500185886efcf3d0330187de394481265c1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 63632500185886efcf3d0330187de394481265c1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCGTTGCGTACAATGT-1, ACTATCCGTTCGGTAA-1, CGAGTCGGTACCGGAT-1, CTCATTTAGAGGATAT-1, CGGACCTAGCGGCTGT-1 (top 5 of 4687 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
63632500185886efcf3d0330187de394481265c1.gz 2.33 GB 1cec9a076c7bee45a4a4133f9b63be15
63632500185886efcf3d0330187de394481265c1.gz.tbi 1.11 MB 4c47f58972caae4d4c6702cfc61926cf
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 490034e9882c4a56fd84476114accc7c
statistics/