Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/650318981f258e811a11fe58f28018e0b5a3cd44content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 650318981f258e811a11fe58f28018e0b5a3cd44
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATTTGTGAGCACCACA-1, GTATCGCCACAGGAAT-1, CATATCGCACAATGCC-1, GAGTTACTCGAAGTAG-1, ATTGGTTCATTGCGGT-1 (top 5 of 3525 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
650318981f258e811a11fe58f28018e0b5a3cd44.gz 1.12 GB 5bad376cc3a27794df2c746ee6af855c
650318981f258e811a11fe58f28018e0b5a3cd44.gz.tbi 828.45 KB af9b50a1e71edc4d7e87e39d44391b44
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 3ec469bcb6584b62faff617e0e680a86
statistics/