Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/6c5c1541fc0966fda493e76a69e505f4da95395econtent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 6c5c1541fc0966fda493e76a69e505f4da95395e
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CATCATGCATGCATAT-1, CTGGACCAGGTTAGAG-1, TCTGTGACACGGTTTA-1, CGCGGATTCTATGACA-1, CTCAATAAGCGATAAG-1 (top 5 of 4987 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
6c5c1541fc0966fda493e76a69e505f4da95395e.gz 1.78 GB 31b079bdc48a29f0b4bff6caa92432f0
6c5c1541fc0966fda493e76a69e505f4da95395e.gz.tbi 1011.68 KB ccade60afa1fa8f499fa11c1f9de6ce0
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 7ae5808d54d6e57156bfee2bf2a141e3
statistics/