Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/763b86e48c54e54aca4b7e192f6461245f9247b8content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 763b86e48c54e54aca4b7e192f6461245f9247b8
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGTGATCAGCTGGACC-1, TTTGTGAAGGCGGATG-1, TTAAAGGCAACCCTCC-1, TTTGTGGCAATGAATG-1, GTTCCTGGTTGCAATG-1 (top 5 of 10891 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
763b86e48c54e54aca4b7e192f6461245f9247b8.gz 3.58 GB d62827b71ae93bb6573b312179be3b04
763b86e48c54e54aca4b7e192f6461245f9247b8.gz.tbi 1.41 MB 401ef94adebff6c38c771fec913cab6a
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB f4f06db924d8bd29d0f224f95662d5c5
statistics/