Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/7a882fa713bf612bbc7068aa170ecb8efc600a82content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 7a882fa713bf612bbc7068aa170ecb8efc600a82
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AAGCCTTAGGTAGCTT-1, TGGTTCCTCACTTTAC-1, TCACATAAGTTCCTGC-1, GCCACTAAGTAACGGA-1, AATCTCAAGGGCCATC-1 (top 5 of 8130 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
7a882fa713bf612bbc7068aa170ecb8efc600a82.gz 3.07 GB 4e4499fd79ff96dc4ef45ab39d968374
7a882fa713bf612bbc7068aa170ecb8efc600a82.gz.tbi 1.28 MB bd277258a140a5c6f4e09bda1ae20ae9
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 98b66a85915a38d6a4991b1aa8f1ebfd
statistics/