Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/7cec95f752307fa028f4192ceef2efc9201bf185content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 7cec95f752307fa028f4192ceef2efc9201bf185
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGCATGAGTTGCGCGA-1, ATGAATGCAGGACCAA-1, ACCCAGGGTTTCGCGC-1, TAGGTGCGTCACAGAC-1, GTCATGAGTCTTACTA-1 (top 5 of 4823 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
7cec95f752307fa028f4192ceef2efc9201bf185.gz 1.86 GB 5a83faf4733a92d68e4825b9fdc839f4
7cec95f752307fa028f4192ceef2efc9201bf185.gz.tbi 1.02 MB cd5d15e9e333c3e98413d25f55c79d37
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 7cc122d10ef93dbba4b8cb6961a0a083
statistics/