Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/7dcb9a125372cd4420f0695d71e67a29d6078ac0content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 7dcb9a125372cd4420f0695d71e67a29d6078ac0
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTTCAGCAAGGTACG-1, TGGAACAAGCCACAAT-1, ATCTATGAGCTTAGTA-1, CAGGTCCAGCGAGTAA-1, TTAAGGACATCGCTTT-1 (top 5 of 2560 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
7dcb9a125372cd4420f0695d71e67a29d6078ac0.gz 1.28 GB e1768844bc9369feb345ecfe0d77913a
7dcb9a125372cd4420f0695d71e67a29d6078ac0.gz.tbi 868.81 KB 45f54a1357180f4e42dff58cbec74fc0
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 6cb51339d6852bd2df851dafd8295e19
statistics/