Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/7eeec281d005691632ab540832a1a9d92c6ca2adcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 7eeec281d005691632ab540832a1a9d92c6ca2ad
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CGCATTACACTAAGCC-1, GCTAGCGGTATACTGG-1, TTTGCATTCGCAATCG-1, TGAACAGAGCAAGATG-1, TGGCGGTTCATCCTAT-1 (top 5 of 2947 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
7eeec281d005691632ab540832a1a9d92c6ca2ad.gz 1.24 GB 59717dfeca773722010101c1d7f1190d
7eeec281d005691632ab540832a1a9d92c6ca2ad.gz.tbi 848.92 KB a5a91a99ee29c006357748b94a12a8c8
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 1e0e262ed3cb390b7d5073ca9640bf2b
statistics/