Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/8255ded7e676a4fcfb8a56c9ff32965c00e976aacontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 8255ded7e676a4fcfb8a56c9ff32965c00e976aa
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACCTGTTGTAACCTAG-1, GCAGGAAGTAGGTTGC-1, TCGTAATCAATGCCTA-1, CTTTAGGCAGGCAAGC-1, TAGTAGGAGGAGGTTA-1 (top 5 of 7456 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
8255ded7e676a4fcfb8a56c9ff32965c00e976aa.gz 2.07 GB 795311330331fdd7e9b38c52673f251e
8255ded7e676a4fcfb8a56c9ff32965c00e976aa.gz.tbi 1.06 MB b04c5c06f29d15939b4c0e6d78508850
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 72fe2933998f18b641fbbce7544e01f0
statistics/