Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/8268a0d34c53fa6bdd8887d7a6b9b612732c8777content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 8268a0d34c53fa6bdd8887d7a6b9b612732c8777
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CTCACACTCCTTGAGG-1, GATTCGCCAGGAATCG-1, CAAGTGAAGCGGATTT-1, TGGATTGGTCATCCTG-1, TGTGTTAAGTCATTTC-1 (top 5 of 4120 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
8268a0d34c53fa6bdd8887d7a6b9b612732c8777.gz 1.41 GB 0fe7e848967b8d0c22f97a71efc2a9ce
8268a0d34c53fa6bdd8887d7a6b9b612732c8777.gz.tbi 901.55 KB 874656c2922839456b25ae845ffd065d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 2b5e893a66e9badb386178b28f0cc864
statistics/