Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/8b89c03853cc48655c6ce43fd6a42699e1b72ac6content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 8b89c03853cc48655c6ce43fd6a42699e1b72ac6
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGGTAAACATTGTGTG-1, GTTACGCCATTGGGAG-1, GAGTTACTCACTAATG-1, CTTGTTCCAATTGAAG-1, TTTCCACCAACTAGAA-1 (top 5 of 4787 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
8b89c03853cc48655c6ce43fd6a42699e1b72ac6.gz 2.12 GB eea4ec65430126238e82d1451678b5a3
8b89c03853cc48655c6ce43fd6a42699e1b72ac6.gz.tbi 1.05 MB 00ad4fa3820b40ea10bd226b3608c9e2
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB bb106eeca050f8627c1a48d246592bf2
statistics/