Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/8d7621e247ae2585282db9eee9ae971831d1ba9dcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 8d7621e247ae2585282db9eee9ae971831d1ba9d
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGAGCAAAGACTTATG-1, AGAACCAAGTTGGCCA-1, AGATGAAGTGCATTAG-1, GGAAGTATCAGTGAAG-1, GACGCCTAGAAGCTAG-1 (top 5 of 5960 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
8d7621e247ae2585282db9eee9ae971831d1ba9d.gz 1.97 GB 9a075c1f92c4e1c6f77c81ed4830d169
8d7621e247ae2585282db9eee9ae971831d1ba9d.gz.tbi 1.03 MB 4668c42a2cbfc3c42d0e5ed918e5d49a
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 4bf460c9bf9fef0f4d60fa061aaa935d
statistics/