Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/915dca412a0fc67bcaf19b0b6baec1bc2c0f23adcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 915dca412a0fc67bcaf19b0b6baec1bc2c0f23ad
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGCGGTAAGGAACCAA-1, GTAGTTTCACAAAGAC-1, AGGTTAGAGTAGCTTA-1, TGGCCAATCCCTTGCG-1, CAGCATTAGAACCTGT-1 (top 5 of 498 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
915dca412a0fc67bcaf19b0b6baec1bc2c0f23ad.gz 340.03 MB 08ce8bce11afa409f4bf148c33cdf75f
915dca412a0fc67bcaf19b0b6baec1bc2c0f23ad.gz.tbi 594.64 KB c0536816b66e21f3cc69444833367479
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB af59121d663619f8004ea1aa91b24dcf
statistics/