Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/931293d1062a54528909385949e19cc804d4eee5content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 931293d1062a54528909385949e19cc804d4eee5
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACAACAGAGGTGAAAT-1, GCCTATTGTCAGGCAT-1, TCTTGACGTGCACGCA-1, CCCAACCGTTCACTGT-1, AGTAATGCAGGCTTCG-1 (top 5 of 5523 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
931293d1062a54528909385949e19cc804d4eee5.gz 1.69 GB b5e71904a38d164aef6f2cf6a95ba4b6
931293d1062a54528909385949e19cc804d4eee5.gz.tbi 978.58 KB c98339035c77b43851c73fdda8e3376e
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB fa4637bed0b9bceed08240ca89cfca3c
statistics/