Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/93719d6b55ee5ddf3302d6701d61233517342374content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 93719d6b55ee5ddf3302d6701d61233517342374
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TATCACGCAATGCGCT-1, CTATGAGGTTCCTGAT-1, CGGTTCCGTCGTAATG-1, AAGCGCTGTTGCTTCG-1, TCAACAATCCGGTATG-1 (top 5 of 6228 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
93719d6b55ee5ddf3302d6701d61233517342374.gz 1.19 GB d45778b0b1a1e1330baa2b463688dcb3
93719d6b55ee5ddf3302d6701d61233517342374.gz.tbi 841.08 KB ac5d5b5f5ee82e0bd40f30f1cfc585cd
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 13046425e9bf13a3ca78c8e1518a623e
statistics/