Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/99021b27a57b463c8240e7a2cbabc60c2a8d77aacontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 99021b27a57b463c8240e7a2cbabc60c2a8d77aa
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CAGGGCTTCCGTTAAA-1, ATCACAATCCCGCCTA-1, CCCTCACCAAGCCACT-1, AAGACATAGTAGGCGG-1, GAGTTTGGTTGGTGAC-1 (top 5 of 6360 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
99021b27a57b463c8240e7a2cbabc60c2a8d77aa.gz 3.35 GB 1f771a88c9a96158947379d085124d51
99021b27a57b463c8240e7a2cbabc60c2a8d77aa.gz.tbi 1.35 MB 22f826e985a17010e23a4ecc26121226
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 354c1aebc45006b0ee8af91575003168
statistics/