Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/990e8143345a648b1f163b3de552db329db9ac9dcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 990e8143345a648b1f163b3de552db329db9ac9d
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AGGTTGCGTTGGTGAC-1, GTACTTAAGCATCCAG-1, ATGTAAGCAATAACCT-1, ACCCGGTAGTAGCCAT-1, TGAAGTGAGGCGAATA-1 (top 5 of 8190 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
990e8143345a648b1f163b3de552db329db9ac9d.gz 2.69 GB b25f3a2a2054020011f9180ac96f3a6e
990e8143345a648b1f163b3de552db329db9ac9d.gz.tbi 1.19 MB cb1f4c771fe2c94d5c76453caf849028
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB a870339e838ed824103acf4e38bcdf44
statistics/