Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/9c9604ad9457dfdfafa49067191d64781c992bcfcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 9c9604ad9457dfdfafa49067191d64781c992bcf
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTCCTCCCATTGCGAC-1, ATGATGGAGGTGTCCA-1, CGGGTATGTTTAGTCC-1, TCTCACCAGTGAGCAA-1, ACAGCGCTCTAATTGG-1 (top 5 of 4832 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
9c9604ad9457dfdfafa49067191d64781c992bcf.gz 1.23 GB f45b1c3fc4ec05e4e3eed125028c587a
9c9604ad9457dfdfafa49067191d64781c992bcf.gz.tbi 845.47 KB c9405eb792def1d46c325f86120f3d71
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB afc46cdf253a234ec74ee51b65cb8ba4
statistics/