Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/9efddd88c260b011f80aaec9806d4f7db5b5f156content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 9efddd88c260b011f80aaec9806d4f7db5b5f156
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATGCAAACAACTCGCG-1, TTTGCGACAATTTAGC-1, CGCAATGTCAGGAACA-1, GCCTGACAGGAATAAC-1, TAGTAGGAGGAGTCTT-1 (top 5 of 10308 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
9efddd88c260b011f80aaec9806d4f7db5b5f156.gz 3.3 GB 53118dc23508af60eb23cac166bfebb8
9efddd88c260b011f80aaec9806d4f7db5b5f156.gz.tbi 1.33 MB 7a8560669ba534df456ba878e2769bf3
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB f3f28133f0aa5df5c4442929dc02846b
statistics/