Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/a421f281f5ab7cfdfca4ec06a0babd6341e9e445content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: a421f281f5ab7cfdfca4ec06a0babd6341e9e445
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATCACAATCGATTCTT-1, CACATTAAGTCATTTC-1, GTTGGCGGTGATGGCT-1, TATGGCCCATGAATCT-1, ACTTGTCGTTGAAGCC-1 (top 5 of 3783 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
a421f281f5ab7cfdfca4ec06a0babd6341e9e445.gz 1.21 GB dd78c27b2c45f0d0fd1cda381926b92a
a421f281f5ab7cfdfca4ec06a0babd6341e9e445.gz.tbi 835.2 KB 035c1144c20be532ea9768907e533d60
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 463723e465016778c464b242578efdf0
statistics/