Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/a97266b89148b310e0778eba29c7d1b394162daccontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: a97266b89148b310e0778eba29c7d1b394162dac
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATTAGCGGTTGAAGCC-1, GAGGCAAGTTTGAGGC-1, TTGTCCCAGTGACCTG-1, CGCGGATTCCAATTAG-1, GGTTGCATCTCCATGC-1 (top 5 of 5399 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
a97266b89148b310e0778eba29c7d1b394162dac.gz 3.08 GB d54d11f459b2b5b6126f0deb23b2386a
a97266b89148b310e0778eba29c7d1b394162dac.gz.tbi 1.27 MB aedc12484d7d6a7b59334dfabe090d1b
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 134d3d99034ee05ebff03ba51be7eb61
statistics/