Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/ac95048ebd7efd83f5f3a6c22187dc5d12111f25content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: ac95048ebd7efd83f5f3a6c22187dc5d12111f25
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TCCTGTTCACATTAAC-1, TATTAGGTCATGGTTA-1, GGCTATTAGGGACGCA-1, CGCCACACATCATGGC-1, ATGGTTATCATTAGTG-1 (top 5 of 1417 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
ac95048ebd7efd83f5f3a6c22187dc5d12111f25.gz 858.1 MB 42b293d9767a79eef1b3278db2a7cd7b
ac95048ebd7efd83f5f3a6c22187dc5d12111f25.gz.tbi 738.4 KB bc8b054bb67475a82392e9dea8ef5a45
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB ae7c44213a53082f9f30b2d879b21515
statistics/