Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/b19a3dc78574d157c7014d3539180d756725ae95content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: b19a3dc78574d157c7014d3539180d756725ae95
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTATGTTCACGTAATT-1, TAGCTTAAGGCGAAAC-1, GTTCTTGTCACGCCAA-1, ATGGTGCGTTGTGATG-1, AAAGGCTCAAGCTAAA-1 (top 5 of 5990 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
b19a3dc78574d157c7014d3539180d756725ae95.gz 1.54 GB 07381adf1adbb645f5ae63b778161d0b
b19a3dc78574d157c7014d3539180d756725ae95.gz.tbi 933.38 KB 798a2b08b908698e86800860133208d7
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 32d7650fc8e196aa41663aae90a45347
statistics/