Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/b5ec3031069e481049e6a57a736b42f4514d51f8content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: b5ec3031069e481049e6a57a736b42f4514d51f8
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GATAATCGTGTCCTGC-1, CGCTCCATCATGGTTA-1, TACGCACCACGTTACA-1, TCAGTAGGTAAATTGC-1, CCCGCAACAGCAAGGC-1 (top 5 of 7501 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
b5ec3031069e481049e6a57a736b42f4514d51f8.gz 2.33 GB f700bc1caa97d28560c146dd00fcaef3
b5ec3031069e481049e6a57a736b42f4514d51f8.gz.tbi 1.1 MB 80cdfbec141289cd1aee9dcdcdfe7560
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 14d6b718efbe454acf68907e9c13518e
statistics/