Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/b800865e793c1d50168985ddb73ac05e67a8df35content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: b800865e793c1d50168985ddb73ac05e67a8df35
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGAGTCTGTAAGCTCA-1, TTTAGCAAGCTAAAGG-1, AGATGCTTCCAGGTTG-1, CTTGACGAGGAGGGTT-1, GGCGGTAAGGGATGAC-1 (top 5 of 7542 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
b800865e793c1d50168985ddb73ac05e67a8df35.gz 1.93 GB 3f547dd7d50dd49932fbdd81aea498c4
b800865e793c1d50168985ddb73ac05e67a8df35.gz.tbi 1.01 MB f11e51a36908d847991fa81884a6a2b2
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 229d4bef0d71ae7c246c6efa08133a9b
statistics/