Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/ba171732c97b2d4465a696177b9cf86aa793f7b2content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: ba171732c97b2d4465a696177b9cf86aa793f7b2
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACCAGGCTCCGCAAAT-1, CGCTACTTCCTCCATA-1, TCGCGCACACCTGCTC-1, CGAACAAAGGCGCTAC-1, TCGCTAACAAGACTCC-1 (top 5 of 7449 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
ba171732c97b2d4465a696177b9cf86aa793f7b2.gz 2.42 GB 158e55f0f6e3c66d9c044b1c32369f3d
ba171732c97b2d4465a696177b9cf86aa793f7b2.gz.tbi 1.12 MB 3dd1ffa781bf3cd9494852f1fee7a4ab
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 7a4e9fbb6d0aea0e2a800e1381212680
statistics/