Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/beaa10b77d5ed540b6ef4e978ca9e1a3b5c394afcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: beaa10b77d5ed540b6ef4e978ca9e1a3b5c394af
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AATTAGCGTCATGCCC-1, TACCTCATCGCTAAAC-1, ACAGGATCATGACTAT-1, GGATGTAAGTACCGCA-1, ACGTTACAGTCAATCA-1 (top 5 of 7756 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
beaa10b77d5ed540b6ef4e978ca9e1a3b5c394af.gz 5.42 GB f9960b6ec789980c770f062c4072fe6a
beaa10b77d5ed540b6ef4e978ca9e1a3b5c394af.gz.tbi 1.74 MB decc672f817ef5a49594ceb3ff9ff80d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 3c2f485f5b3ca4256f9d975c45ffe0d0
statistics/