Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/c3c27bf775fdc4ebd5a90c6d1404669fed59311acontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: c3c27bf775fdc4ebd5a90c6d1404669fed59311a
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATGACGAAGTCATTAG-1, ATTCAACCACTTCATC-1, CAGTACCCATTAGCGC-1, ACTGAATGTTAGCTGA-1, CTATAACCAACTAGAA-1 (top 5 of 5713 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
c3c27bf775fdc4ebd5a90c6d1404669fed59311a.gz 2.39 GB a86918aa0efdb132aa009a92ba327b81
c3c27bf775fdc4ebd5a90c6d1404669fed59311a.gz.tbi 1.12 MB 74a18317eab5dd12db33e7e55d603d50
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 75d5869807ba34cb8c7a1e15ba4ab58b
statistics/