Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/c4c9930f80a3c4603442d7c7e217f9fd87af6f2acontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: c4c9930f80a3c4603442d7c7e217f9fd87af6f2a
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AATTGTGTCGCAGGCT-1, ACAGGATCAAATGCCC-1, TGCACTTGTCAAAGGG-1, TGCGATTAGTAACCAC-1, GGTACAAAGCTGTAAC-1 (top 5 of 3201 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
c4c9930f80a3c4603442d7c7e217f9fd87af6f2a.gz 1.33 GB 51899a57d360391c01e48ddd56a2ae59
c4c9930f80a3c4603442d7c7e217f9fd87af6f2a.gz.tbi 887.34 KB 3df3e3beb5760ad2bfa7efcae00b36e0
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 18808c41ec125c22bbd5395c24fb91db
statistics/