Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/c81415f9b437fc6250c2fea1aba9e902db2d6ee7content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: c81415f9b437fc6250c2fea1aba9e902db2d6ee7
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGCTTCATCGTGCCTT-1, AGAGGAACATGAGTTT-1, GATCGCTCAATTAGCT-1, TTATTGCTCGCAGGCT-1, AGGGTTGCAAGGACCA-1 (top 5 of 6018 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
c81415f9b437fc6250c2fea1aba9e902db2d6ee7.gz 2.71 GB 1c42285b499d5665fe970e7983fddbeb
c81415f9b437fc6250c2fea1aba9e902db2d6ee7.gz.tbi 1.2 MB b4491f6e3f89e3bc75d00ab6a37e0153
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 7ef2cd97236df72eadc03b45d78dba40
statistics/