Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/d0edec2fe684233a42e5560369b2808656ab14f0content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: d0edec2fe684233a42e5560369b2808656ab14f0
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CAGCTCAAGAGGAAGG-1, GGGTTTCCACCCACCT-1, CGAAGGCCAGATTCAT-1, AGAAACTAGTTATGTG-1, GTTGGAGCACAGCCTG-1 (top 5 of 5458 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
d0edec2fe684233a42e5560369b2808656ab14f0.gz 1.12 GB a6c84069d924d6157c8dde16b9f88704
d0edec2fe684233a42e5560369b2808656ab14f0.gz.tbi 818.15 KB 4ed176c151b31bb95291d37fc8b6672b
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB d225b068d480269eb4096c901babdaf3
statistics/