Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/d4efbc4d77cc512aa9a8f0b549a2464bc1573437content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: d4efbc4d77cc512aa9a8f0b549a2464bc1573437
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ATTAGCGGTGTGAGAG-1, TACTGACAGCCTAACG-1, ATTAGCTCATTGCGAC-1, TTCCTTGAGTAAGTGG-1, GGTCAAGCACACAATT-1 (top 5 of 8502 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
d4efbc4d77cc512aa9a8f0b549a2464bc1573437.gz 3.19 GB 071c21109ec2ae4ad1278b45ad2f5cd8
d4efbc4d77cc512aa9a8f0b549a2464bc1573437.gz.tbi 1.32 MB 6f2a89641987752de3af8426e7975bdb
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 8bcdb596f055c6fcd7d9f5b290d5f0cd
statistics/