Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/d7db0f4ebe05173d2c03f5cda9254c9fc988073ccontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: d7db0f4ebe05173d2c03f5cda9254c9fc988073c
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CGTGAGGAGCGGATAA-1, ATTTAGCCATCCCTCA-1, ATGCAGGCAAAGCGGC-1, TGGTAAACATTAAGCT-1, TTAGACTCATAAGTCT-1 (top 5 of 11956 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
d7db0f4ebe05173d2c03f5cda9254c9fc988073c.gz 2.67 GB 295a5bf521ee9820439133227e7c0014
d7db0f4ebe05173d2c03f5cda9254c9fc988073c.gz.tbi 1.18 MB 2c5b46f0d167e4c5266e5d57a5c5a188
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB e29233270af60ad1f594c2a52b8d4ab3
statistics/