Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/dbda42044f1db5905bc069372b00389da0b318accontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: dbda42044f1db5905bc069372b00389da0b318ac
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTCTTAGTGTCCAAA-1, ATGCATTCAAGGTAAC-1, GCTTCGCGTAGGTGTC-1, GCACTAAGTTTGCAGA-1, GTAAGGTCAACTGGGA-1 (top 5 of 6767 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
dbda42044f1db5905bc069372b00389da0b318ac.gz 2.33 GB 3bd97fd6e053b8ea2d0eb96085c5011f
dbda42044f1db5905bc069372b00389da0b318ac.gz.tbi 1.11 MB 77671c8467cad75792e17d79f2e02b79
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB c13384919939d6e29465f5330af9322d
statistics/