Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/df498b31adc2d0aecf4ea80300bd4ffe14732d14content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: df498b31adc2d0aecf4ea80300bd4ffe14732d14
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GAACACAAGTTCCTCA-1, TTAGAAGCATAGTCAT-1, TACGGTTAGCTGGACC-1, GTACTTAAGGGACCTC-1, GCTTCGCGTACCGAAC-1 (top 5 of 1827 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
df498b31adc2d0aecf4ea80300bd4ffe14732d14.gz 1.57 GB 8ae39b8c007f91021096e87cd21ff100
df498b31adc2d0aecf4ea80300bd4ffe14732d14.gz.tbi 961.48 KB 23b81a4a4c5b39f28af45cf04dddff86
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 6723a87c91aca3336b1c1ca271ff4928
statistics/