Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/df666d73d3737093daec72299dc669246515eab0content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: df666d73d3737093daec72299dc669246515eab0
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTGTGAGCAATTAACC-1, GCTCGATCACAGCCAT-1, GTGTTCCTCCCTCAGT-1, ACCAGGCTCCTTGCAC-1, AGAGGATGTTGAGCCG-1 (top 5 of 4629 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
df666d73d3737093daec72299dc669246515eab0.gz 2.16 GB f1dc095493ba560dbf747171253eb4fc
df666d73d3737093daec72299dc669246515eab0.gz.tbi 1.06 MB 2bf461b99ac95b8282a9b46fb6158e7e
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB ee9cdaef30a97f1f6be52b305beb5c4e
statistics/