Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/e0b0c44bc61aa6463647a065d265bb634f65281dcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: e0b0c44bc61aa6463647a065d265bb634f65281d
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGTTGCACAACTCGCG-1, CGTGAGGAGTTCCCAC-1, ACCAGGGAGCTGTCAG-1, CCTAATCGTCACCTAT-1, ATGGTCTAGGAGCATA-1 (top 5 of 5669 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
e0b0c44bc61aa6463647a065d265bb634f65281d.gz 1.83 GB 3f81a92d1f41cd2406cf30460b94f373
e0b0c44bc61aa6463647a065d265bb634f65281d.gz.tbi 1015.87 KB 0edbd2e431f7aa62f296b9d0991a82d4
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 4ac744d2e734b1d2a8868e8d5e596607
statistics/