Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/e4f5e76a7bd79bb6ab517bc59a30770cf184554acontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: e4f5e76a7bd79bb6ab517bc59a30770cf184554a
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AGCTAAACAATAGCCC-1, CAGCCTAAGCGAGGTG-1, TGCCGGTAGGGATGAC-1, CGTGTGTCAAGTAAGC-1, GGTACTAGTTGTTCAC-1 (top 5 of 4522 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
e4f5e76a7bd79bb6ab517bc59a30770cf184554a.gz 1.53 GB 5b46617e65456fd0eac7862aafcc875d
e4f5e76a7bd79bb6ab517bc59a30770cf184554a.gz.tbi 939.71 KB 9d1fc090701d2bf169c710508f7d5444
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB b2e83f8e2c18899dd3464b27256a7a39
statistics/