Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/e946e3431119b6cb98f3f85b4952fb474e4cde3fcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: e946e3431119b6cb98f3f85b4952fb474e4cde3f
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TACTGGCCAATTAGCT-1, TTTACGAAGTGAACAG-1, ACAGGATCATGTTGGC-1, ACGAATCTCAAAGGCA-1, TGAACAGAGGTGTTAC-1 (top 5 of 13578 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
e946e3431119b6cb98f3f85b4952fb474e4cde3f.gz 3.07 GB 759a2982bb3708ba66cc3665441ddafa
e946e3431119b6cb98f3f85b4952fb474e4cde3f.gz.tbi 1.27 MB dbde903a4c65996b7af6f9b6c11ed789
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 6d828e4d9e245b604355c63000a980f1
statistics/