Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/eba42ed12567f81b09a06d4c2270ab0aa8ce1ddccontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: eba42ed12567f81b09a06d4c2270ab0aa8ce1ddc
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACACTTGCAATGAAGC-1, GGTATTTCACGTGCTG-1, CCACTTGGTGTTTGCT-1, AGGATGCAGGCCATCA-1, AAGGTGCAGGCGGGTA-1 (top 5 of 5326 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
eba42ed12567f81b09a06d4c2270ab0aa8ce1ddc.gz 1.92 GB 779c9477bcb329be8c3a505a932aaac6
eba42ed12567f81b09a06d4c2270ab0aa8ce1ddc.gz.tbi 1.02 MB de53bcaf85377d62b7e9e441e4bda772
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB da7e3f39731bcb6efaa061d158c57970
statistics/