Resource

Id summary/johansen2025Crossspecies/atac_fragments/macaque/eeab5a232f5330dd2f9d764f1a8e558b8ba3f62acontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: eeab5a232f5330dd2f9d764f1a8e558b8ba3f62a
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Macaque/genome/Mmul_10
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: macaque
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGTGGAGCAGGAATCG-1, GAGCGGTCAGACAAAC-1, AAGTTAGCAGGAACAT-1, TGTTGTGCAACAGCCT-1, AGACCCGGTTAGACCA-1 (top 5 of 10244 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
eeab5a232f5330dd2f9d764f1a8e558b8ba3f62a.gz 2.79 GB 70a52cd46f3c7f3ff0eebff25b230a77
eeab5a232f5330dd2f9d764f1a8e558b8ba3f62a.gz.tbi 1.21 MB 52d180e2e29f6b3635412f11a0c5aff2
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 3b6e2a75961bde65b102f404281e96cc
statistics/